Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 KRT17P1-201ENST00000399211 1546 ntBASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 SLC29A4P1-201ENST00000398760 971 ntBASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC196A0A1B0GTZ2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 BX276092.2-201ENST00000417668 665 ntBASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 TSPY6P-201ENST00000448518 926 ntBASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
CCDC196A0A1B0GTZ2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
CCDC196A0A1B0GTZ2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.58■■□□□ 1.36
CCDC196A0A1B0GTZ2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCDC196A0A1B0GTZ2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.57■■□□□ 1.36
CCDC196A0A1B0GTZ2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 SLC25A24-204ENST00000569674 2357 ntBASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 MIPEPP3-201ENST00000412105 444 ntBASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC196A0A1B0GTZ2 AC092667.1-201ENST00000434301 2586 ntBASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 GUSBP6-202ENST00000438529 1198 ntBASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC196A0A1B0GTZ2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 C2orf69P4-201ENST00000565394 541 ntBASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms