Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC060766.5-201ENST00000590539 871 ntBASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 HLA-B-256ENST00000639848 1089 ntBASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV4-28A0A0C4DH34 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 POU5F1P3-201ENST00000428824 1078 ntBASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 PLK5-205ENST00000642079 1969 ntBASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC092368.3-202ENST00000574180 1591 ntBASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
IGHV4-28A0A0C4DH34 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 MIR2861-201ENST00000636310 90 ntBASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV4-28A0A0C4DH34 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 ESRRAP1-201ENST00000400596 1257 ntBASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 UNC93B5-201ENST00000530315 699 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms