Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 POU5F1P4-201ENST00000413175 1085 ntBASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 MIR2861-201ENST00000636310 90 ntBASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 AC098818.2-201ENST00000564925 2320 ntBASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV5A0A0B4J249 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 AC096631.2-201ENST00000436136 790 ntBASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV5A0A0B4J249 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV5A0A0B4J249 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV5A0A0B4J249 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TRAV5A0A0B4J249 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV5A0A0B4J249 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
TRAV5A0A0B4J249 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV5A0A0B4J249 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 AP001330.3-201ENST00000520123 633 ntBASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 AC018445.3-201ENST00000624177 1945 ntBASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV5A0A0B4J249 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV5A0A0B4J249 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms