Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ABHD17AP1-201ENST00000358206 933 ntBASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC092118.2-201ENST00000613495 667 ntBASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC092720.2-201ENST00000602388 1665 ntBASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC105020.6-201ENST00000621523 1217 ntBASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AP005212.1-201ENST00000581547 1997 ntBASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC073314.1-201ENST00000568729 2216 ntBASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 BX276092.2-201ENST00000417668 665 ntBASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AL589743.5-201ENST00000616611 1050 ntBASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.42■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 GABARAPL3-202ENST00000624044 1851 ntBASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC020907.5-201ENST00000624372 1936 ntBASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms