Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 KRT8P36-201ENST00000489121 1440 ntBASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 MYCNOS-205ENST00000641950 531 ntBASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV27A0A087WT01 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV27A0A087WT01 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 DPP3P2-201ENST00000416030 1696 ntBASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRAV27A0A087WT01 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 CDV3P1-201ENST00000471403 739 ntBASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 FAM21FP-204ENST00000608637 956 ntBASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV27A0A087WT01 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 NTF6G-201ENST00000591094 616 ntBASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms