Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RNA5SP263-201ENST00000363376 128 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 SNORA73A-201ENST00000364938 206 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 MIR614-201ENST00000385082 90 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RPSAP42-201ENST00000403415 878 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RAET1K-201ENST00000403651 784 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 FAM218BP-201ENST00000408897 458 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AP001116.1-201ENST00000421604 762 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AL445686.1-201ENST00000443086 348 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AL590648.1-201ENST00000456479 460 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RPL5P17-201ENST00000469685 877 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RN7SL608P-201ENST00000492377 279 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 OR7E129P-201ENST00000504655 968 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RN7SKP190-201ENST00000516079 286 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC018653.2-201ENST00000540190 238 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC024270.1-201ENST00000559181 404 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 APOOP5-202ENST00000564761 566 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AP000915.1-201ENST00000580756 548 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC011444.4-201ENST00000586415 418 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AL445223.1-201ENST00000595998 1051 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AL136141.1-201ENST00000605780 369 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC010542.5-201ENST00000612427 382 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 AC099654.4-201ENST00000614168 1059 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NPIPA3F8WFD2 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 AC013444.1-201ENST00000428909 1904 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 EEF1A1P10-201ENST00000475365 1390 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 AP001528.3-201ENST00000624364 3249 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 AC092894.1-201ENST00000486726 1563 ntTSL 5 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 MORF4L1P1-201ENST00000404582 967 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 RN7SL496P-201ENST00000470372 290 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 MYADML-203ENST00000491596 951 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 AL136967.1-201ENST00000625120 441 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 HCCAT5-202ENST00000642127 1029 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 AC005831.1-201ENST00000624384 1697 ntBASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPIPA3F8WFD2 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC073072.1-201ENST00000325042 1364 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms