Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SNX18Q96RF0 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
SNX18Q96RF0 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC7.71□□□□□ -1.17
SNX18Q96RF0 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SNX18Q96RF0 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 OR7E25P-202ENST00000641088 5937 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 SNORD3G-201ENST00000362796 215 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 COX17P1-201ENST00000378775 192 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 CNN2P7-201ENST00000400583 932 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 HIST1H2BPS2-201ENST00000402707 340 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 AL590286.1-201ENST00000404178 291 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 AL049734.1-201ENST00000422384 608 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 CFL1P7-201ENST00000424759 486 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AC152007.1-201ENST00000428521 224 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AL359839.1-201ENST00000451975 1160 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 C3orf52-204ENST00000480282 1080 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 RACK1-211ENST00000504726 388 ntTSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 RPL23AP96-201ENST00000514593 591 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 ADAM20P2-201ENST00000515830 1273 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 OSGEPL1-AS1-201ENST00000520651 508 ntTSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AP001767.2-201ENST00000527291 382 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AC087761.1-201ENST00000568836 556 ntTSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 DYM-207ENST00000578396 755 ntTSL 3 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 MIR4266-201ENST00000583300 55 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 RN7SL474P-201ENST00000583485 301 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 E2F3P1-201ENST00000589887 1230 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 AC087742.2-201ENST00000616113 740 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AC118282.4-201ENST00000623090 1712 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 LINC00294-201ENST00000631190 3306 ntBASIC7.71□□□□□ -1.18
SNX18Q96RF0 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.18
SNX18Q96RF0 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNX18Q96RF0 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 USP46-207ENST00000508499 1419 ntTSL 2 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AL049842.1-201ENST00000402902 1479 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 MAPK10-333ENST00000641607 2481 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 TMEM19-204ENST00000549735 1772 ntTSL 2 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 RN7SKP112-201ENST00000411213 318 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC018738.1-201ENST00000441378 210 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC107983.1-201ENST00000442562 210 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 RBMY2BP-202ENST00000451071 1156 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 RN7SL580P-201ENST00000492489 287 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 IGKV2D-18-201ENST00000519785 375 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC022784.5-201ENST00000522241 437 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms