Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 AF186192.3-201ENST00000583427 947 ntBASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 AL121829.2-201ENST00000620908 328 ntBASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HCFC2Q9Y5Z7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 HTR7P1-201ENST00000538670 1336 ntBASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 AC242852.2-201ENST00000615738 1807 ntBASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 CD177P1-201ENST00000606252 935 ntBASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC2Q9Y5Z7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 AL355355.2-201ENST00000442321 338 ntBASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 GUSBP5-202ENST00000510805 1989 ntBASIC21.36■■□□□ 1.01
HCFC2Q9Y5Z7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 MMP23A-201ENST00000234610 1017 ntBASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 TMPOP1-202ENST00000424642 1267 ntBASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 KRT16P5-201ENST00000455284 522 ntBASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 AL445228.2-201ENST00000605589 952 ntBASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
HCFC2Q9Y5Z7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 AC233723.2-201ENST00000623798 2106 ntBASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 RN7SL850P-201ENST00000579959 291 ntBASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
HCFC2Q9Y5Z7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 AL353807.1-201ENST00000427475 662 ntBASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms