Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 AC092720.2-201ENST00000602388 1665 ntBASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 AC007322.4-201ENST00000509611 723 ntBASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 AL162412.1-201ENST00000567129 965 ntBASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA11Q9Y5H2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA11Q9Y5H2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA11Q9Y5H2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA11Q9Y5H2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA11Q9Y5H2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.64■□□□□ 0.74
PCDHGA11Q9Y5H2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA11Q9Y5H2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDHGA11Q9Y5H2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA11Q9Y5H2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 AC006015.1-201ENST00000429970 570 ntBASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 AL162430.1-201ENST00000480705 870 ntBASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGA11Q9Y5H2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 MFSD11-216ENST00000590393 1141 ntBASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA11Q9Y5H2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms