Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 AC090192.1-201ENST00000517740 490 ntBASIC20.37■□□□□ 0.85
PKP3Q9Y446 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 CYP2T3P-201ENST00000601990 817 ntBASIC20.37■□□□□ 0.85
PKP3Q9Y446 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 MKRN4P-201ENST00000444706 1521 ntBASIC20.37■□□□□ 0.85
PKP3Q9Y446 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 FEM1AP1-201ENST00000431297 1995 ntBASIC20.36■□□□□ 0.85
PKP3Q9Y446 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 AC083906.2-201ENST00000511578 360 ntBASIC20.36■□□□□ 0.85
PKP3Q9Y446 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PKP3Q9Y446 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
PKP3Q9Y446 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PKP3Q9Y446 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
PKP3Q9Y446 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 NCF1B-203ENST00000435988 1254 ntBASIC20.34■□□□□ 0.85
PKP3Q9Y446 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 AC092720.2-201ENST00000602388 1665 ntBASIC20.34■□□□□ 0.85
PKP3Q9Y446 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PKP3Q9Y446 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PKP3Q9Y446 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PKP3Q9Y446 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PKP3Q9Y446 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PKP3Q9Y446 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PKP3Q9Y446 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PKP3Q9Y446 GPX1P1-201ENST00000388829 606 ntBASIC20.33■□□□□ 0.85
PKP3Q9Y446 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PKP3Q9Y446 AL355472.2-201ENST00000422958 438 ntBASIC20.33■□□□□ 0.85
PKP3Q9Y446 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.33■□□□□ 0.85
PKP3Q9Y446 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.33■□□□□ 0.85
PKP3Q9Y446 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.33■□□□□ 0.85
PKP3Q9Y446 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.33■□□□□ 0.85
PKP3Q9Y446 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.33■□□□□ 0.85
PKP3Q9Y446 AL589743.5-201ENST00000616611 1050 ntBASIC20.33■□□□□ 0.85
PKP3Q9Y446 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms