Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 AC006557.6-201ENST00000623071 864 ntBASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NCKAP1Q9Y2A7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 AL596275.1-201ENST00000423464 877 ntBASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1Q9Y2A7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 Z98882.1-201ENST00000622160 2253 ntBASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1Q9Y2A7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NCKAP1Q9Y2A7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms