Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDZRN3Q9UPQ7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.18■■□□□ 1.78
PDZRN3Q9UPQ7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 MIR4497-201ENST00000583208 89 ntBASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 CYP2T3P-201ENST00000601990 817 ntBASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDZRN3Q9UPQ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 KRT17P1-201ENST00000399211 1546 ntBASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 RPPH1-201ENST00000516869 333 ntBASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDZRN3Q9UPQ7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 KRT17P3-201ENST00000420566 1262 ntBASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 AC073912.3-201ENST00000624414 853 ntBASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDZRN3Q9UPQ7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 CDV3P1-201ENST00000471403 739 ntBASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 AL589743.5-201ENST00000616611 1050 ntBASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 FAM197Y4-202ENST00000622692 608 ntBASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDZRN3Q9UPQ7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.77
PDZRN3Q9UPQ7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PDZRN3Q9UPQ7 PLK5-205ENST00000642079 1969 ntBASIC26.14■■□□□ 1.77
PDZRN3Q9UPQ7 LINC01006-201ENST00000333319 2292 ntBASIC26.14■■□□□ 1.77
PDZRN3Q9UPQ7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PDZRN3Q9UPQ7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PDZRN3Q9UPQ7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PDZRN3Q9UPQ7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDZRN3Q9UPQ7 AC061975.6-201ENST00000579045 1553 ntBASIC26.13■■□□□ 1.77
PDZRN3Q9UPQ7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDZRN3Q9UPQ7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.13■■□□□ 1.77
PDZRN3Q9UPQ7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDZRN3Q9UPQ7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.13■■□□□ 1.77
PDZRN3Q9UPQ7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.13■■□□□ 1.77
PDZRN3Q9UPQ7 FEM1AP1-201ENST00000431297 1995 ntBASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms