Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 AC233702.5-201ENST00000584107 538 ntBASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42EP3Q9UKI2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 AL135905.2-201ENST00000584934 1404 ntBASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42EP3Q9UKI2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC42EP3Q9UKI2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 RPS2P55-201ENST00000397318 883 ntBASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 AC107956.1-201ENST00000494359 873 ntBASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 AC233263.1-201ENST00000578059 224 ntBASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 MIR4785-201ENST00000585005 73 ntBASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42EP3Q9UKI2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDC42EP3Q9UKI2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDC42EP3Q9UKI2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDC42EP3Q9UKI2 AC092667.1-201ENST00000434301 2586 ntBASIC16.89■□□□□ 0.3
CDC42EP3Q9UKI2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42EP3Q9UKI2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42EP3Q9UKI2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms