Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 KRT8P36-201ENST00000489121 1440 ntBASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 POU5F1P3-201ENST00000428824 1078 ntBASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 UNC93B5-201ENST00000530315 699 ntBASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX43Q9NXZ2 AC092368.3-202ENST00000574180 1591 ntBASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX43Q9NXZ2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX43Q9NXZ2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX43Q9NXZ2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
DDX43Q9NXZ2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.64■■□□□ 1.06
DDX43Q9NXZ2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.64■■□□□ 1.06
DDX43Q9NXZ2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 PNMA6B-201ENST00000538162 1200 ntBASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX43Q9NXZ2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 AC006128.1-201ENST00000624704 1661 ntBASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 ESRRAP1-201ENST00000400596 1257 ntBASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX43Q9NXZ2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 TMEM191A-211ENST00000637163 1067 ntBASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
DDX43Q9NXZ2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 PKD1P6-201ENST00000343738 4769 ntBASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX43Q9NXZ2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms