Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 AC055733.4-201ENST00000638462 1354 ntBASIC19.61■□□□□ 0.73
NDE1Q9NXR1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.61■□□□□ 0.73
NDE1Q9NXR1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDE1Q9NXR1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 UNC93B8-201ENST00000511903 705 ntBASIC19.6■□□□□ 0.73
NDE1Q9NXR1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 SYT6-210ENST00000641643 1587 ntBASIC19.6■□□□□ 0.73
NDE1Q9NXR1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDE1Q9NXR1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.59■□□□□ 0.73
NDE1Q9NXR1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 AC136469.2-201ENST00000623944 1028 ntBASIC19.59■□□□□ 0.73
NDE1Q9NXR1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDE1Q9NXR1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDE1Q9NXR1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.58■□□□□ 0.73
NDE1Q9NXR1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDE1Q9NXR1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.58■□□□□ 0.73
NDE1Q9NXR1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 AC125437.2-201ENST00000625180 2167 ntBASIC19.58■□□□□ 0.72
NDE1Q9NXR1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 AIRN-201ENST00000601203 4374 ntBASIC19.58■□□□□ 0.72
NDE1Q9NXR1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.58■□□□□ 0.72
NDE1Q9NXR1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms