Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 AC079140.4-201ENST00000507448 529 ntBASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 AC245052.3-201ENST00000450182 901 ntBASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 FP700111.2-201ENST00000619190 1892 ntBASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 KRT87P-202ENST00000534226 1464 ntBASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHB16Q9NRJ7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 AC073314.1-201ENST00000568729 2216 ntBASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 AC061975.6-201ENST00000579045 1553 ntBASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 TPRG1LP1-201ENST00000598702 760 ntBASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 KRT16P2-201ENST00000414673 1423 ntBASIC17.55■□□□□ 0.4
PCDHB16Q9NRJ7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB16Q9NRJ7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHB16Q9NRJ7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms