Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.66■■□□□ 1.06
TLR9Q9NR96 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TLR9Q9NR96 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TLR9Q9NR96 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TLR9Q9NR96 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.64■■□□□ 1.06
TLR9Q9NR96 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TLR9Q9NR96 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.64■■□□□ 1.05
TLR9Q9NR96 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.64■■□□□ 1.05
TLR9Q9NR96 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
TLR9Q9NR96 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.64■■□□□ 1.05
TLR9Q9NR96 AC012306.2-201ENST00000609350 630 ntBASIC21.64■■□□□ 1.05
TLR9Q9NR96 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.64■■□□□ 1.05
TLR9Q9NR96 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.64■■□□□ 1.05
TLR9Q9NR96 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TLR9Q9NR96 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.63■■□□□ 1.05
TLR9Q9NR96 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.63■■□□□ 1.05
TLR9Q9NR96 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.63■■□□□ 1.05
TLR9Q9NR96 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TLR9Q9NR96 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TLR9Q9NR96 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TLR9Q9NR96 RCN1P1-201ENST00000400413 996 ntBASIC21.62■■□□□ 1.05
TLR9Q9NR96 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TLR9Q9NR96 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.62■■□□□ 1.05
TLR9Q9NR96 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.62■■□□□ 1.05
TLR9Q9NR96 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.62■■□□□ 1.05
TLR9Q9NR96 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.62■■□□□ 1.05
TLR9Q9NR96 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
TLR9Q9NR96 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TLR9Q9NR96 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TLR9Q9NR96 AL117328.2-201ENST00000624617 1940 ntBASIC21.62■■□□□ 1.05
TLR9Q9NR96 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TLR9Q9NR96 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.62■■□□□ 1.05
TLR9Q9NR96 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.62■■□□□ 1.05
TLR9Q9NR96 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 AC026471.5-201ENST00000615068 467 ntBASIC21.61■■□□□ 1.05
TLR9Q9NR96 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
TLR9Q9NR96 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TLR9Q9NR96 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TLR9Q9NR96 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TLR9Q9NR96 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TLR9Q9NR96 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.6■■□□□ 1.05
TLR9Q9NR96 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.6■■□□□ 1.05
TLR9Q9NR96 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.6■■□□□ 1.05
TLR9Q9NR96 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TLR9Q9NR96 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms