Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ITM2C-210ENST00000620962 501 ntBASIC22.34■■□□□ 1.17
RNF39Q9H2S5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF39Q9H2S5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF39Q9H2S5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF39Q9H2S5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF39Q9H2S5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 PRORSD1P-201ENST00000295112 541 ntBASIC22.33■■□□□ 1.17
RNF39Q9H2S5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF39Q9H2S5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RNF39Q9H2S5 Z98882.1-201ENST00000622160 2253 ntBASIC22.33■■□□□ 1.16
RNF39Q9H2S5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 AC066615.1-201ENST00000640911 628 ntBASIC22.32■■□□□ 1.16
RNF39Q9H2S5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
RNF39Q9H2S5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 KRT18P29-201ENST00000397031 1267 ntBASIC22.31■■□□□ 1.16
RNF39Q9H2S5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 UNC93B5-201ENST00000530315 699 ntBASIC22.31■■□□□ 1.16
RNF39Q9H2S5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 AC005014.3-201ENST00000605985 190 ntBASIC22.31■■□□□ 1.16
RNF39Q9H2S5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF39Q9H2S5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 AC009268.1-201ENST00000561352 1203 ntBASIC22.3■■□□□ 1.16
RNF39Q9H2S5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF39Q9H2S5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 MTND4LP31-201ENST00000514859 294 ntBASIC22.29■■□□□ 1.16
RNF39Q9H2S5 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 AL157762.1-201ENST00000619612 415 ntBASIC22.29■■□□□ 1.16
RNF39Q9H2S5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF39Q9H2S5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms