Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 AC026271.2-201ENST00000428091 497 ntBASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 AC010536.3-201ENST00000620306 533 ntBASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 TERF1P5-201ENST00000477545 1207 ntBASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 FAM21FP-204ENST00000608637 956 ntBASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 MIR5787-201ENST00000611784 55 ntBASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC68Q9H2F9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 MIR2861-201ENST00000636310 90 ntBASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 AC092720.2-201ENST00000602388 1665 ntBASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC68Q9H2F9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC68Q9H2F9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 AL591742.1-201ENST00000604433 565 ntBASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC68Q9H2F9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms