Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 LINC01465-201ENST00000408887 1940 ntBASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 PCDHB18P-201ENST00000524813 2368 ntBASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SLIRPQ9GZT3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 MIR4449-201ENST00000578365 66 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 pRNA.6-201ENST00000610482 90 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 pRNA.5-201ENST00000612139 90 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 pRNA.11-201ENST00000618423 90 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 pRNA.13-201ENST00000619112 90 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 AC241377.3-202ENST00000626088 1088 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 AC241585.3-202ENST00000628937 1088 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 AC245100.8-202ENST00000629247 1058 ntBASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLIRPQ9GZT3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 AC021242.3-201ENST00000607598 1377 ntBASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLIRPQ9GZT3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 MIR4508-201ENST00000584178 70 ntBASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 AL390961.4-201ENST00000623958 2535 ntBASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLIRPQ9GZT3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLIRPQ9GZT3 AL032819.2-201ENST00000624543 2162 ntBASIC17.84■□□□□ 0.45
SLIRPQ9GZT3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms