Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CPNE1Q99829 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CPNE1Q99829 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE1Q99829 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE1Q99829 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE1Q99829 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE1Q99829 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE1Q99829 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.29■□□□□ 0.84
CPNE1Q99829 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE1Q99829 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE1Q99829 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE1Q99829 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE1Q99829 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CPNE1Q99829 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE1Q99829 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE1Q99829 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE1Q99829 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE1Q99829 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE1Q99829 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CPNE1Q99829 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE1Q99829 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPNE1Q99829 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE1Q99829 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE1Q99829 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE1Q99829 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.27■□□□□ 0.84
CPNE1Q99829 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 KRT19P1-201ENST00000405746 1186 ntBASIC20.27■□□□□ 0.84
CPNE1Q99829 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE1Q99829 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE1Q99829 CDV3P1-201ENST00000471403 739 ntBASIC20.27■□□□□ 0.84
CPNE1Q99829 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE1Q99829 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE1Q99829 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CPNE1Q99829 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE1Q99829 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE1Q99829 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.27■□□□□ 0.83
CPNE1Q99829 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.27■□□□□ 0.83
CPNE1Q99829 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE1Q99829 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE1Q99829 AC007952.6-201ENST00000573168 2673 ntBASIC20.27■□□□□ 0.83
CPNE1Q99829 AC003957.1-201ENST00000625108 2673 ntBASIC20.27■□□□□ 0.83
CPNE1Q99829 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE1Q99829 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE1Q99829 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE1Q99829 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE1Q99829 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE1Q99829 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE1Q99829 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE1Q99829 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE1Q99829 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE1Q99829 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE1Q99829 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE1Q99829 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE1Q99829 DPP3P2-201ENST00000416030 1696 ntBASIC20.26■□□□□ 0.83
CPNE1Q99829 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE1Q99829 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms