Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG4P5Q96PW8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 AL050303.2-201ENST00000619798 666 ntBASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG4P5Q96PW8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 AC026185.1-201ENST00000445748 174 ntBASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 AC093787.1-201ENST00000450396 207 ntBASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG4P5Q96PW8 AC010980.2-201ENST00000587099 1412 ntBASIC20.95■□□□□ 0.95
CSPG4P5Q96PW8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 SMG8-203ENST00000578922 2178 ntBASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 CYP2T3P-201ENST00000601990 817 ntBASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG4P5Q96PW8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 KRT18P68-201ENST00000392293 1000 ntBASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 AL355472.2-201ENST00000422958 438 ntBASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 CROCCP5-201ENST00000436658 830 ntBASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 AC133552.2-202ENST00000575694 574 ntBASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG4P5Q96PW8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CSPG4P5Q96PW8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSPG4P5Q96PW8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms