Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 HLA-L-209ENST00000420110 1011 ntBASIC16.92■□□□□ 0.3
GAFA1Q96PS6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 AC020907.5-201ENST00000624372 1936 ntBASIC16.92■□□□□ 0.3
GAFA1Q96PS6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GAFA1Q96PS6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 AL157384.1-201ENST00000445995 2473 ntBASIC16.91■□□□□ 0.3
GAFA1Q96PS6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GAFA1Q96PS6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 ID1-201ENST00000376105 1233 ntBASIC16.9■□□□□ 0.3
GAFA1Q96PS6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.9■□□□□ 0.3
GAFA1Q96PS6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 AL138781.1-201ENST00000566567 1274 ntBASIC16.9■□□□□ 0.3
GAFA1Q96PS6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 AC092118.2-201ENST00000613495 667 ntBASIC16.9■□□□□ 0.3
GAFA1Q96PS6 GABARAPL3-202ENST00000624044 1851 ntBASIC16.9■□□□□ 0.3
GAFA1Q96PS6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.9■□□□□ 0.3
GAFA1Q96PS6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GAFA1Q96PS6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.89■□□□□ 0.3
GAFA1Q96PS6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
GAFA1Q96PS6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GAFA1Q96PS6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms