Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AC004911.1-201ENST00000416316 871 ntBASIC20.86■□□□□ 0.93
C9orf72Q96LT7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 KRT18P61-201ENST00000585825 1298 ntBASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
C9orf72Q96LT7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 TCF3P1-201ENST00000423021 1937 ntBASIC20.85■□□□□ 0.93
C9orf72Q96LT7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 AC090192.1-201ENST00000517740 490 ntBASIC20.85■□□□□ 0.93
C9orf72Q96LT7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf72Q96LT7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf72Q96LT7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.83■□□□□ 0.93
C9orf72Q96LT7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
C9orf72Q96LT7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
C9orf72Q96LT7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
C9orf72Q96LT7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 AC004854.2-201ENST00000608450 1441 ntBASIC20.82■□□□□ 0.92
C9orf72Q96LT7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
C9orf72Q96LT7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.81■□□□□ 0.92
C9orf72Q96LT7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms