Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC58Q96CX6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC58Q96CX6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC58Q96CX6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LRRC58Q96CX6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC58Q96CX6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC58Q96CX6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC58Q96CX6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 AP001330.3-201ENST00000520123 633 ntBASIC19.28■□□□□ 0.68
LRRC58Q96CX6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC58Q96CX6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC58Q96CX6 KRT87P-202ENST00000534226 1464 ntBASIC19.27■□□□□ 0.67
LRRC58Q96CX6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC58Q96CX6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC58Q96CX6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC58Q96CX6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC58Q96CX6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC58Q96CX6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 AL691432.2-201ENST00000607222 2038 ntBASIC19.26■□□□□ 0.67
LRRC58Q96CX6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 PBX2P1-201ENST00000493219 1291 ntBASIC19.26■□□□□ 0.67
LRRC58Q96CX6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 AC138907.5-202ENST00000569484 235 ntBASIC19.26■□□□□ 0.67
LRRC58Q96CX6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 RASA4CP-201ENST00000424092 1398 ntBASIC19.26■□□□□ 0.67
LRRC58Q96CX6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC58Q96CX6 TMEM179-206ENST00000616017 1645 ntBASIC19.25■□□□□ 0.67
LRRC58Q96CX6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC58Q96CX6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
LRRC58Q96CX6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC58Q96CX6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC58Q96CX6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC58Q96CX6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC58Q96CX6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC58Q96CX6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms