Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 KRT87P-202ENST00000534226 1464 ntBASIC19.48■□□□□ 0.71
VPS33AQ96AX1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 AC079140.4-201ENST00000507448 529 ntBASIC19.48■□□□□ 0.71
VPS33AQ96AX1 MIR6084-201ENST00000622012 110 ntBASIC19.48■□□□□ 0.71
VPS33AQ96AX1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 AC087289.5-201ENST00000586076 3175 ntBASIC19.48■□□□□ 0.71
VPS33AQ96AX1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS33AQ96AX1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS33AQ96AX1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 AC245052.3-201ENST00000450182 901 ntBASIC19.46■□□□□ 0.71
VPS33AQ96AX1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS33AQ96AX1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 SUDS3P1-201ENST00000505831 966 ntBASIC19.45■□□□□ 0.7
VPS33AQ96AX1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS33AQ96AX1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 KRT16P2-201ENST00000414673 1423 ntBASIC19.44■□□□□ 0.7
VPS33AQ96AX1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 AC138907.5-202ENST00000569484 235 ntBASIC19.44■□□□□ 0.7
VPS33AQ96AX1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 MIR2861-201ENST00000636310 90 ntBASIC19.44■□□□□ 0.7
VPS33AQ96AX1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 AC125437.2-201ENST00000625180 2167 ntBASIC19.44■□□□□ 0.7
VPS33AQ96AX1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VPS33AQ96AX1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 AL358852.1-201ENST00000623174 1268 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms