Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE4Q96A23 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE4Q96A23 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE4Q96A23 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE4Q96A23 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE4Q96A23 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE4Q96A23 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE4Q96A23 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE4Q96A23 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE4Q96A23 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE4Q96A23 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE4Q96A23 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE4Q96A23 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE4Q96A23 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.22■□□□□ 0.51
CPNE4Q96A23 AC098934.4-201ENST00000564127 592 ntBASIC18.22■□□□□ 0.51
CPNE4Q96A23 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE4Q96A23 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE4Q96A23 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE4Q96A23 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE4Q96A23 KRT8P36-201ENST00000489121 1440 ntBASIC18.22■□□□□ 0.51
CPNE4Q96A23 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE4Q96A23 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE4Q96A23 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE4Q96A23 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE4Q96A23 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 MYC-209ENST00000641252 345 ntBASIC18.21■□□□□ 0.51
CPNE4Q96A23 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE4Q96A23 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CPNE4Q96A23 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.21■□□□□ 0.5
CPNE4Q96A23 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.2■□□□□ 0.5
CPNE4Q96A23 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE4Q96A23 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CPNE4Q96A23 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.19■□□□□ 0.5
CPNE4Q96A23 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CPNE4Q96A23 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.19■□□□□ 0.5
CPNE4Q96A23 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.19■□□□□ 0.5
CPNE4Q96A23 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CPNE4Q96A23 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.19■□□□□ 0.5
CPNE4Q96A23 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CPNE4Q96A23 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE4Q96A23 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms