Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ATP2A3Q93084 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A3Q93084 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A3Q93084 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 AC098590.1-201ENST00000468126 897 ntBASIC21.34■■□□□ 1.01
ATP2A3Q93084 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 AP003097.1-201ENST00000530657 1135 ntBASIC21.34■■□□□ 1.01
ATP2A3Q93084 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A3Q93084 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2A3Q93084 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A3Q93084 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A3Q93084 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A3Q93084 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2A3Q93084 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2A3Q93084 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ATP2A3Q93084 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP2A3Q93084 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A3Q93084 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A3Q93084 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP2A3Q93084 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A3Q93084 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A3Q93084 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A3Q93084 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A3Q93084 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A3Q93084 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
ATP2A3Q93084 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
ATP2A3Q93084 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2A3Q93084 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
ATP2A3Q93084 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2A3Q93084 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATP2A3Q93084 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ATP2A3Q93084 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.32■■□□□ 1
ATP2A3Q93084 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.32■■□□□ 1
ATP2A3Q93084 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 KRT18P68-201ENST00000392293 1000 ntBASIC21.32■■□□□ 1
ATP2A3Q93084 AC128676.1-201ENST00000454392 318 ntBASIC21.32■■□□□ 1
ATP2A3Q93084 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.32■■□□□ 1
ATP2A3Q93084 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.32■■□□□ 1
ATP2A3Q93084 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.32■■□□□ 1
ATP2A3Q93084 AC060766.5-201ENST00000590539 871 ntBASIC21.32■■□□□ 1
ATP2A3Q93084 HLA-B-256ENST00000639848 1089 ntBASIC21.32■■□□□ 1
ATP2A3Q93084 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A3Q93084 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.31■■□□□ 1
ATP2A3Q93084 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2A3Q93084 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2A3Q93084 GCSHP5-201ENST00000443090 522 ntBASIC21.31■■□□□ 1
ATP2A3Q93084 RPS2P52-201ENST00000469610 820 ntBASIC21.31■■□□□ 1
ATP2A3Q93084 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2A3Q93084 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2A3Q93084 AP006294.2-201ENST00000641667 209 ntBASIC21.31■■□□□ 1
ATP2A3Q93084 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
ATP2A3Q93084 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2A3Q93084 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.3■■□□□ 1
ATP2A3Q93084 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.3■■□□□ 1
ATP2A3Q93084 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.3■■□□□ 1
ATP2A3Q93084 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.3■■□□□ 1
ATP2A3Q93084 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.3■■□□□ 1
ATP2A3Q93084 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.3■■□□□ 1
ATP2A3Q93084 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ATP2A3Q93084 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.3■■□□□ 1
ATP2A3Q93084 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.3■■□□□ 1
ATP2A3Q93084 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP2A3Q93084 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.3■■□□□ 1
ATP2A3Q93084 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A3Q93084 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.29■■□□□ 1
ATP2A3Q93084 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.29■■□□□ 1
ATP2A3Q93084 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP2A3Q93084 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ATP2A3Q93084 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2A3Q93084 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.29■■□□□ 1
ATP2A3Q93084 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.29■■□□□ 1
ATP2A3Q93084 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms