Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.88■□□□□ 0.45
AP3S1Q92572 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 AC006455.2-201ENST00000429931 906 ntBASIC17.88■□□□□ 0.45
AP3S1Q92572 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
AP3S1Q92572 AC103834.1-201ENST00000520383 144 ntBASIC17.88■□□□□ 0.45
AP3S1Q92572 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3S1Q92572 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3S1Q92572 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3S1Q92572 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.88■□□□□ 0.45
AP3S1Q92572 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3S1Q92572 BX005040.4-201ENST00000637145 1518 ntBASIC17.88■□□□□ 0.45
AP3S1Q92572 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S1Q92572 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S1Q92572 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S1Q92572 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
AP3S1Q92572 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
AP3S1Q92572 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
AP3S1Q92572 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
AP3S1Q92572 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S1Q92572 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
AP3S1Q92572 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S1Q92572 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3S1Q92572 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
AP3S1Q92572 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3S1Q92572 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3S1Q92572 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S1Q92572 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.86■□□□□ 0.45
AP3S1Q92572 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S1Q92572 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 TSPY13P-201ENST00000338964 914 ntBASIC17.86■□□□□ 0.45
AP3S1Q92572 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AP3S1Q92572 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.86■□□□□ 0.45
AP3S1Q92572 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
AP3S1Q92572 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
AP3S1Q92572 AC026471.1-201ENST00000564629 3026 ntBASIC17.86■□□□□ 0.45
AP3S1Q92572 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 TMEM179-206ENST00000616017 1645 ntBASIC17.86■□□□□ 0.45
AP3S1Q92572 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3S1Q92572 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.86■□□□□ 0.45
AP3S1Q92572 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S1Q92572 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3S1Q92572 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3S1Q92572 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
AP3S1Q92572 LETM1P2-201ENST00000597330 2178 ntBASIC17.85■□□□□ 0.45
AP3S1Q92572 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3S1Q92572 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP3S1Q92572 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
AP3S1Q92572 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S1Q92572 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
AP3S1Q92572 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S1Q92572 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
AP3S1Q92572 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S1Q92572 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3S1Q92572 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3S1Q92572 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.84■□□□□ 0.45
AP3S1Q92572 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S1Q92572 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S1Q92572 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.83■□□□□ 0.45
AP3S1Q92572 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S1Q92572 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
AP3S1Q92572 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
AP3S1Q92572 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms