Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 AC133552.2-202ENST00000575694 574 ntBASIC20.71■□□□□ 0.91
SCG3Q8WXD2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG3Q8WXD2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 CNN2P6-201ENST00000439038 900 ntBASIC20.7■□□□□ 0.9
SCG3Q8WXD2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 SLC7A5P2-201ENST00000553010 536 ntBASIC20.7■□□□□ 0.9
SCG3Q8WXD2 AC142086.2-201ENST00000569753 217 ntBASIC20.7■□□□□ 0.9
SCG3Q8WXD2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 AC006128.1-201ENST00000624704 1661 ntBASIC20.7■□□□□ 0.9
SCG3Q8WXD2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.7■□□□□ 0.9
SCG3Q8WXD2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.69■□□□□ 0.9
SCG3Q8WXD2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.68■□□□□ 0.9
SCG3Q8WXD2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 AC105036.2-201ENST00000569468 176 ntBASIC20.68■□□□□ 0.9
SCG3Q8WXD2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 AC008694.1-202ENST00000636953 945 ntBASIC20.68■□□□□ 0.9
SCG3Q8WXD2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCG3Q8WXD2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 AC121338.2-201ENST00000622535 1744 ntBASIC20.67■□□□□ 0.9
SCG3Q8WXD2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms