Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 POM121L13P-201ENST00000422362 380 ntBASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 RPPH1-201ENST00000516869 333 ntBASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 RN7SL471P-201ENST00000580476 299 ntBASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.11■□□□□ 0.97
SH3RF2Q8TEC5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 UBE2SP1-201ENST00000450587 669 ntBASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 RPS2P4-201ENST00000476944 856 ntBASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SH3RF2Q8TEC5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 FAM197Y4-202ENST00000622692 608 ntBASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.09■□□□□ 0.97
SH3RF2Q8TEC5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 AC006557.6-201ENST00000623071 864 ntBASIC21.08■□□□□ 0.97
SH3RF2Q8TEC5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF2Q8TEC5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 AC005829.2-201ENST00000571422 1056 ntBASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.07■□□□□ 0.96
SH3RF2Q8TEC5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms