Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 SUDS3P1-201ENST00000505831 966 ntBASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 AC116050.2-201ENST00000612102 1779 ntBASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BBS1Q8NFJ9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 SLC7A5P2-201ENST00000553010 536 ntBASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 AL358852.1-201ENST00000623174 1268 ntBASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BBS1Q8NFJ9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 AC010141.2-201ENST00000452426 721 ntBASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BBS1Q8NFJ9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms