Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 MCRIP2P1-201ENST00000394346 511 ntBASIC17.76■□□□□ 0.43
CPEB3Q8NE35 AL512625.2-201ENST00000417533 625 ntBASIC17.76■□□□□ 0.43
CPEB3Q8NE35 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 AC006970.2-201ENST00000450065 779 ntBASIC17.76■□□□□ 0.43
CPEB3Q8NE35 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.76■□□□□ 0.43
CPEB3Q8NE35 AC090192.1-201ENST00000517740 490 ntBASIC17.76■□□□□ 0.43
CPEB3Q8NE35 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPEB3Q8NE35 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 AC087633.2-202ENST00000565166 1439 ntBASIC17.75■□□□□ 0.43
CPEB3Q8NE35 AL355472.2-201ENST00000422958 438 ntBASIC17.75■□□□□ 0.43
CPEB3Q8NE35 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 AC092667.1-201ENST00000434301 2586 ntBASIC17.75■□□□□ 0.43
CPEB3Q8NE35 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.75■□□□□ 0.43
CPEB3Q8NE35 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 LINC01006-201ENST00000333319 2292 ntBASIC17.74■□□□□ 0.43
CPEB3Q8NE35 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 KRT8P36-201ENST00000489121 1440 ntBASIC17.74■□□□□ 0.43
CPEB3Q8NE35 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 AP005212.1-201ENST00000581547 1997 ntBASIC17.74■□□□□ 0.43
CPEB3Q8NE35 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 AC083906.2-201ENST00000511578 360 ntBASIC17.74■□□□□ 0.43
CPEB3Q8NE35 AF201337.1-201ENST00000520239 748 ntBASIC17.74■□□□□ 0.43
CPEB3Q8NE35 AC105036.2-201ENST00000569468 176 ntBASIC17.74■□□□□ 0.43
CPEB3Q8NE35 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPEB3Q8NE35 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.73■□□□□ 0.43
CPEB3Q8NE35 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 CYP2T3P-201ENST00000601990 817 ntBASIC17.73■□□□□ 0.43
CPEB3Q8NE35 AL356652.1-201ENST00000615962 565 ntBASIC17.73■□□□□ 0.43
CPEB3Q8NE35 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CPEB3Q8NE35 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms