Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC026271.3-201ENST00000571884 352 ntBASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 AL121829.2-201ENST00000620908 328 ntBASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 AC093323.1-202ENST00000635031 2045 ntBASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC168Q8NDH2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC168Q8NDH2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 LIN28AP1-201ENST00000429574 405 ntBASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 FAM207BP-201ENST00000447172 505 ntBASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 AC023511.2-201ENST00000618803 211 ntBASIC17.08■□□□□ 0.32
CCDC168Q8NDH2 AC026471.6-201ENST00000622954 1905 ntBASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 RNF152P1-201ENST00000397754 604 ntBASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC168Q8NDH2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 KSR1P1-201ENST00000446298 240 ntBASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 AC004263.2-201ENST00000617183 678 ntBASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC168Q8NDH2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms