Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHPFQ8IZ52 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHPFQ8IZ52 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 MIR718-201ENST00000390190 70 ntBASIC20.7■□□□□ 0.9
CHPFQ8IZ52 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHPFQ8IZ52 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHPFQ8IZ52 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.68■□□□□ 0.9
CHPFQ8IZ52 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.67■□□□□ 0.9
CHPFQ8IZ52 AC244015.2-201ENST00000616358 1861 ntBASIC20.67■□□□□ 0.9
CHPFQ8IZ52 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.66■□□□□ 0.9
CHPFQ8IZ52 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPFQ8IZ52 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.66■□□□□ 0.9
CHPFQ8IZ52 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.66■□□□□ 0.9
CHPFQ8IZ52 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.66■□□□□ 0.9
CHPFQ8IZ52 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.66■□□□□ 0.9
CHPFQ8IZ52 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPFQ8IZ52 AC006557.6-201ENST00000623071 864 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms