Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 RARRES2P4-201ENST00000514074 484 ntBASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 AL512408.1-201ENST00000569378 2000 ntBASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC116Q8IYX3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 AC008694.1-202ENST00000636953 945 ntBASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC116Q8IYX3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 CYP2T1P-201ENST00000432607 1285 ntBASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 AC069236.1-201ENST00000604339 616 ntBASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 AC073111.5-205ENST00000641717 521 ntBASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC116Q8IYX3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC116Q8IYX3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms