Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 TSPY7P-201ENST00000431358 1114 ntBASIC25.28■■□□□ 1.64
DDX60Q8IY21 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX60Q8IY21 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.28■■□□□ 1.64
DDX60Q8IY21 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
DDX60Q8IY21 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.27■■□□□ 1.64
DDX60Q8IY21 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.27■■□□□ 1.64
DDX60Q8IY21 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
DDX60Q8IY21 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.27■■□□□ 1.64
DDX60Q8IY21 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
DDX60Q8IY21 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.27■■□□□ 1.64
DDX60Q8IY21 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
DDX60Q8IY21 AC124283.5-201ENST00000624661 1809 ntBASIC25.27■■□□□ 1.64
DDX60Q8IY21 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.27■■□□□ 1.64
DDX60Q8IY21 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 AC073912.3-201ENST00000624414 853 ntBASIC25.26■■□□□ 1.63
DDX60Q8IY21 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 AC027702.1-201ENST00000563810 1770 ntBASIC25.26■■□□□ 1.63
DDX60Q8IY21 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX60Q8IY21 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
DDX60Q8IY21 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.26■■□□□ 1.63
DDX60Q8IY21 AL049637.2-201ENST00000641778 930 ntBASIC25.26■■□□□ 1.63
DDX60Q8IY21 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
DDX60Q8IY21 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.25■■□□□ 1.63
DDX60Q8IY21 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.25■■□□□ 1.63
DDX60Q8IY21 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.25■■□□□ 1.63
DDX60Q8IY21 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.25■■□□□ 1.63
DDX60Q8IY21 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.25■■□□□ 1.63
DDX60Q8IY21 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.25■■□□□ 1.63
DDX60Q8IY21 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
DDX60Q8IY21 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DDX60Q8IY21 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DDX60Q8IY21 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX60Q8IY21 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX60Q8IY21 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX60Q8IY21 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX60Q8IY21 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX60Q8IY21 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX60Q8IY21 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 AL390719.1-204ENST00000412397 1219 ntBASIC25.23■■□□□ 1.63
DDX60Q8IY21 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 AC110285.5-201ENST00000611501 352 ntBASIC25.23■■□□□ 1.63
DDX60Q8IY21 AC113410.3-201ENST00000623366 203 ntBASIC25.23■■□□□ 1.63
DDX60Q8IY21 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
DDX60Q8IY21 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX60Q8IY21 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms