Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCUBE3Q8IX30 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCUBE3Q8IX30 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
SCUBE3Q8IX30 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 LINC01006-201ENST00000333319 2292 ntBASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCUBE3Q8IX30 AP005212.1-201ENST00000581547 1997 ntBASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 AL355802.2-201ENST00000402069 882 ntBASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 MIR4758-201ENST00000577688 71 ntBASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 AC092118.2-201ENST00000613495 667 ntBASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 AC092720.2-201ENST00000602388 1665 ntBASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCUBE3Q8IX30 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms