Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71Q8IV32 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19■□□□□ 0.63
CCDC71Q8IV32 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CCDC71Q8IV32 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19■□□□□ 0.63
CCDC71Q8IV32 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19■□□□□ 0.63
CCDC71Q8IV32 CD99P1-205ENST00000527459 561 ntBASIC19■□□□□ 0.63
CCDC71Q8IV32 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19■□□□□ 0.63
CCDC71Q8IV32 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19■□□□□ 0.63
CCDC71Q8IV32 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CCDC71Q8IV32 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19■□□□□ 0.63
CCDC71Q8IV32 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19■□□□□ 0.63
CCDC71Q8IV32 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19■□□□□ 0.63
CCDC71Q8IV32 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19■□□□□ 0.63
CCDC71Q8IV32 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19■□□□□ 0.63
CCDC71Q8IV32 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71Q8IV32 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19■□□□□ 0.63
CCDC71Q8IV32 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 AC142086.2-201ENST00000569753 217 ntBASIC18.99■□□□□ 0.63
CCDC71Q8IV32 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 AC087289.5-201ENST00000586076 3175 ntBASIC18.99■□□□□ 0.63
CCDC71Q8IV32 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC71Q8IV32 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 AC099778.1-201ENST00000568593 1911 ntBASIC18.98■□□□□ 0.63
CCDC71Q8IV32 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 AL138781.1-201ENST00000566567 1274 ntBASIC18.98■□□□□ 0.63
CCDC71Q8IV32 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71Q8IV32 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 SLC7A5P2-201ENST00000553010 536 ntBASIC18.97■□□□□ 0.63
CCDC71Q8IV32 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71Q8IV32 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 SLC29A4P1-201ENST00000398760 971 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms