Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 MIR1224-201ENST00000408193 85 ntBASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 TSPY15P-201ENST00000457163 923 ntBASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPAS4Q8IUM7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
NPAS4Q8IUM7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 AC087499.1-201ENST00000418141 1075 ntBASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPAS4Q8IUM7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 AL355075.4-201ENST00000554988 638 ntBASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 AC133561.5-201ENST00000635547 218 ntBASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPAS4Q8IUM7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 AC027702.1-201ENST00000563810 1770 ntBASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 KRT8P36-201ENST00000489121 1440 ntBASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPAS4Q8IUM7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPAS4Q8IUM7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPAS4Q8IUM7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPAS4Q8IUM7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPAS4Q8IUM7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPAS4Q8IUM7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.86■■□□□ 1.09
NPAS4Q8IUM7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPAS4Q8IUM7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms