Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3HC1Q86WB0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 DPP3P2-201ENST00000416030 1696 ntBASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3HC1Q86WB0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 TERF1P5-201ENST00000477545 1207 ntBASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 AC010536.3-201ENST00000620306 533 ntBASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3HC1Q86WB0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3HC1Q86WB0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 AL591742.1-201ENST00000604433 565 ntBASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 MIR6821-201ENST00000617625 74 ntBASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3HC1Q86WB0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms