Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRTM1Q86UE6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 AC245052.3-201ENST00000450182 901 ntBASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 AC012414.1-201ENST00000556676 535 ntBASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 TPRG1LP1-201ENST00000598702 760 ntBASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LRRTM1Q86UE6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRTM1Q86UE6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM1Q86UE6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.58■□□□□ 0.41
LRRTM1Q86UE6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM1Q86UE6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM1Q86UE6 KRT16P2-201ENST00000414673 1423 ntBASIC17.58■□□□□ 0.41
LRRTM1Q86UE6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 AC116050.2-201ENST00000612102 1779 ntBASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM1Q86UE6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 TMEM179-206ENST00000616017 1645 ntBASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM1Q86UE6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms