Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 REXO1L10P-201ENST00000615707 1290 ntBASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 AC006011.2-201ENST00000621313 1158 ntBASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS13BQ7Z7G8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13BQ7Z7G8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.39
VPS13BQ7Z7G8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.39
VPS13BQ7Z7G8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13BQ7Z7G8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13BQ7Z7G8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13BQ7Z7G8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 SLC25A3P1-201ENST00000443844 931 ntBASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 AF186192.3-201ENST00000583427 947 ntBASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 AC124283.5-201ENST00000624661 1809 ntBASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 KRT18P22-201ENST00000402024 1347 ntBASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 AC233723.2-201ENST00000623798 2106 ntBASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 CDV3P1-201ENST00000471403 739 ntBASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 EP400NL-214ENST00000641289 2402 ntBASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VPS13BQ7Z7G8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 RBM17P1-201ENST00000453646 1190 ntBASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
VPS13BQ7Z7G8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13BQ7Z7G8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms