Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 KRT8P36-201ENST00000489121 1440 ntBASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NHLRC1Q6VVB1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 AC020907.5-201ENST00000624372 1936 ntBASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 RARRES2P4-201ENST00000514074 484 ntBASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 RAP2CP1-201ENST00000605103 478 ntBASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.21■□□□□ 0.51
NHLRC1Q6VVB1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 AL162377.1-201ENST00000618844 1793 ntBASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 AC231657.2-201ENST00000624556 255 ntBASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NHLRC1Q6VVB1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 CDCA4P2-201ENST00000441182 718 ntBASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 AC080038.1-201ENST00000611274 1154 ntBASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NHLRC1Q6VVB1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms