Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 AC097658.1-201ENST00000475555 843 ntBASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 LINC01521-201ENST00000504184 1943 ntBASIC21.16■□□□□ 0.98
RFWD3Q6PCD5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 AL589743.5-201ENST00000616611 1050 ntBASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 AC121338.2-201ENST00000622535 1744 ntBASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.15■□□□□ 0.98
RFWD3Q6PCD5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD3Q6PCD5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD3Q6PCD5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD3Q6PCD5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RFWD3Q6PCD5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD3Q6PCD5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD3Q6PCD5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.14■□□□□ 0.97
RFWD3Q6PCD5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 RNA5SP413-201ENST00000516373 109 ntBASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD3Q6PCD5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 AL391422.3-201ENST00000603791 2761 ntBASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 AC087633.2-202ENST00000565166 1439 ntBASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.12■□□□□ 0.97
RFWD3Q6PCD5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 PLK5-205ENST00000642079 1969 ntBASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 MIR4651-201ENST00000582622 73 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms