Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 AL158211.5-201ENST00000623583 2518 ntBASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKAL1Q5VV42 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 FAM21FP-204ENST00000608637 956 ntBASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.24■■□□□ 1.15
CDKAL1Q5VV42 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDKAL1Q5VV42 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDKAL1Q5VV42 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 TMEM179-206ENST00000616017 1645 ntBASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 AC116562.4-201ENST00000641316 2276 ntBASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
CDKAL1Q5VV42 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms