Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4L2-201ENST00000561772 1275 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4L6-201ENST00000626483 1275 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4L1-201ENST00000627662 1275 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4L8-201ENST00000629013 1275 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4L3-201ENST00000630187 1275 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4L7-201ENST00000630678 1275 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DUX4L5-201ENST00000630834 1275 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 KRT8P36-201ENST00000489121 1440 ntBASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RUNDC3AQ59EK9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RUNDC3AQ59EK9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RUNDC3AQ59EK9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 RNF165-205ENST00000588679 2904 ntBASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 AC104187.1-201ENST00000607510 612 ntBASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RUNDC3AQ59EK9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 AC027612.3-201ENST00000413684 1047 ntBASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 AC091799.1-201ENST00000422823 811 ntBASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 AP001160.3-201ENST00000601484 763 ntBASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 AC116562.4-201ENST00000641316 2276 ntBASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 AL158211.5-201ENST00000623583 2518 ntBASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RUNDC3AQ59EK9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RUNDC3AQ59EK9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms