Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 AL355075.4-201ENST00000554988 638 ntBASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 AC110285.5-201ENST00000611501 352 ntBASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.78■■□□□ 1.08
CTC1Q2NKJ3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 AC073130.3-201ENST00000624389 2278 ntBASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTC1Q2NKJ3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CTC1Q2NKJ3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.77■■□□□ 1.07
CTC1Q2NKJ3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CTC1Q2NKJ3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CTC1Q2NKJ3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 AC239809.2-201ENST00000415381 517 ntBASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 AC120498.8-201ENST00000614275 531 ntBASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTC1Q2NKJ3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 RARRES2P10-201ENST00000564312 460 ntBASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CTC1Q2NKJ3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 C2orf69P4-201ENST00000565394 541 ntBASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 CD177P1-201ENST00000606252 935 ntBASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTC1Q2NKJ3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTC1Q2NKJ3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTC1Q2NKJ3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms