Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1EQ15878 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1EQ15878 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1EQ15878 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1EQ15878 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1EQ15878 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 KRT16P5-201ENST00000455284 522 ntBASIC19.91■□□□□ 0.78
CACNA1EQ15878 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 AL049597.2-201ENST00000565575 961 ntBASIC19.91■□□□□ 0.78
CACNA1EQ15878 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.91■□□□□ 0.78
CACNA1EQ15878 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1EQ15878 NBPF21P-201ENST00000425093 1451 ntBASIC19.9■□□□□ 0.78
CACNA1EQ15878 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 AF186192.3-201ENST00000583427 947 ntBASIC19.9■□□□□ 0.78
CACNA1EQ15878 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.9■□□□□ 0.78
CACNA1EQ15878 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1EQ15878 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.9■□□□□ 0.78
CACNA1EQ15878 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.89■□□□□ 0.78
CACNA1EQ15878 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1EQ15878 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1EQ15878 AL390719.1-204ENST00000412397 1219 ntBASIC19.89■□□□□ 0.77
CACNA1EQ15878 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.89■□□□□ 0.77
CACNA1EQ15878 AL121906.2-201ENST00000621597 723 ntBASIC19.89■□□□□ 0.77
CACNA1EQ15878 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.89■□□□□ 0.77
CACNA1EQ15878 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.89■□□□□ 0.77
CACNA1EQ15878 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1EQ15878 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1EQ15878 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1EQ15878 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1EQ15878 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1EQ15878 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1EQ15878 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1EQ15878 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
CACNA1EQ15878 AC026471.5-201ENST00000615068 467 ntBASIC19.88■□□□□ 0.77
CACNA1EQ15878 MIR6786-201ENST00000616843 113 ntBASIC19.88■□□□□ 0.77
CACNA1EQ15878 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1EQ15878 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1EQ15878 AC242852.2-201ENST00000615738 1807 ntBASIC19.88■□□□□ 0.77
CACNA1EQ15878 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 AC145285.6-201ENST00000604632 637 ntBASIC19.87■□□□□ 0.77
CACNA1EQ15878 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 KRT18P57-201ENST00000443599 1254 ntBASIC19.87■□□□□ 0.77
CACNA1EQ15878 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CACNA1EQ15878 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1EQ15878 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms