Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 YNL010WYNL010W 726 nt2.54□□□□□ -2
HRD3Q05787 YPR146CYPR146C 330 nt2.54□□□□□ -2
HRD3Q05787 YBR085C-AYBR085C-A 258 nt2.54□□□□□ -2
HRD3Q05787 MZM1YDR493W 372 nt2.53□□□□□ -2
HRD3Q05787 RPL40AYIL148W 387 nt2.53□□□□□ -2
HRD3Q05787 YIL156W-BYIL156W-B 222 nt2.53□□□□□ -2
HRD3Q05787 YMR290W-AYMR290W-A 348 nt2.53□□□□□ -2
HRD3Q05787 YOR055WYOR055W 435 nt2.53□□□□□ -2
HRD3Q05787 CDC24YAL041W 2565 nt2.53□□□□□ -2.01
HRD3Q05787 VTC3YPL019C 2508 nt2.52□□□□□ -2.01
HRD3Q05787 PFF1YBR074W 2931 nt2.52□□□□□ -2.01
HRD3Q05787 GCN4YEL009C 846 nt2.52□□□□□ -2.01
HRD3Q05787 FCF2YLR051C 654 nt2.52□□□□□ -2.01
HRD3Q05787 RGM1YMR182C 636 nt2.52□□□□□ -2.01
HRD3Q05787 OSW7YFR039C 1533 nt2.52□□□□□ -2.01
HRD3Q05787 NOT5YPR072W 1683 nt2.51□□□□□ -2.01
HRD3Q05787 YDR183C-AYDR183C-A 258 nt2.51□□□□□ -2.01
HRD3Q05787 RPS24AYER074W 408 nt2.51□□□□□ -2.01
HRD3Q05787 LSO2YGR169C-A 279 nt2.51□□□□□ -2.01
HRD3Q05787 YGR174W-AYGR174W-A 87 nt2.51□□□□□ -2.01
HRD3Q05787 YHR086W-AYHR086W-A 162 nt2.51□□□□□ -2.01
HRD3Q05787 YMR324CYMR324C 243 nt2.51□□□□□ -2.01
HRD3Q05787 YPL182CYPL182C 384 nt2.51□□□□□ -2.01
HRD3Q05787 PRK1YIL095W 2433 nt2.51□□□□□ -2.01
HRD3Q05787 NUM1YDR150W 8247 nt2.5□□□□□ -2.01
HRD3Q05787 YGL014C-AYGL014C-A 162 nt2.5□□□□□ -2.01
HRD3Q05787 YHR063W-AYHR063W-A 336 nt2.5□□□□□ -2.01
HRD3Q05787 MCM22YJR135C 720 nt2.5□□□□□ -2.01
HRD3Q05787 PHO91YNR013C 2685 nt2.5□□□□□ -2.01
HRD3Q05787 KSP1YHR082C 3090 nt2.5□□□□□ -2.01
HRD3Q05787 JSN1YJR091C 3276 nt2.49□□□□□ -2.01
HRD3Q05787 SRO77YBL106C 3033 nt2.49□□□□□ -2.01
HRD3Q05787 YER121WYER121W 345 nt2.49□□□□□ -2.01
HRD3Q05787 HCH1YNL281W 462 nt2.49□□□□□ -2.01
HRD3Q05787 YPR203WYPR203W 309 nt2.49□□□□□ -2.01
HRD3Q05787 SAP1YER047C 2694 nt2.49□□□□□ -2.01
HRD3Q05787 SCP160YJL080C 3669 nt2.49□□□□□ -2.01
HRD3Q05787 TMN3YER113C 2121 nt2.48□□□□□ -2.01
HRD3Q05787 PDR11YIL013C 4236 nt2.48□□□□□ -2.01
HRD3Q05787 MSB1YOR188W 3414 nt2.48□□□□□ -2.01
HRD3Q05787 ARP8YOR141C 2646 nt2.48□□□□□ -2.01
HRD3Q05787 NFT1YKR103W 3657 nt2.48□□□□□ -2.01
HRD3Q05787 YDR169C-AYDR169C-A 150 nt2.48□□□□□ -2.01
HRD3Q05787 YFL063WYFL063W 456 nt2.48□□□□□ -2.01
HRD3Q05787 YJL020W-AYJL020W-A 258 nt2.48□□□□□ -2.01
HRD3Q05787 YBR121C-AYBR121C-A 159 nt2.48□□□□□ -2.01
HRD3Q05787 RKM1YPL208W 1752 nt2.48□□□□□ -2.01
HRD3Q05787 DUG2YBR281C 2637 nt2.48□□□□□ -2.01
HRD3Q05787 YPR089WYPR089W 2667 nt2.47□□□□□ -2.01
HRD3Q05787 RRP12YPL012W 3687 nt2.47□□□□□ -2.01
HRD3Q05787 YIL066W-AYIL066W-A 444 nt2.47□□□□□ -2.01
HRD3Q05787 HSK3YKL138C-A 210 nt2.47□□□□□ -2.01
HRD3Q05787 BNR1YIL159W 4128 nt2.47□□□□□ -2.01
HRD3Q05787 AIM9YER080W 1884 nt2.47□□□□□ -2.01
HRD3Q05787 KAR3YPR141C 2190 nt2.47□□□□□ -2.01
HRD3Q05787 SRB8YCR081W 4284 nt2.47□□□□□ -2.01
HRD3Q05787 YBT1YLL048C 4986 nt2.46□□□□□ -2.02
HRD3Q05787 GCV2YMR189W 3105 nt2.46□□□□□ -2.02
HRD3Q05787 YDL025W-AYDL025W-A 105 nt2.46□□□□□ -2.02
HRD3Q05787 RPL20AYMR242C 519 nt2.46□□□□□ -2.02
HRD3Q05787 YOR072W-AYOR072W-A 249 nt2.46□□□□□ -2.02
HRD3Q05787 MMS1YPR164W 4224 nt2.46□□□□□ -2.02
HRD3Q05787 ESC1YMR219W 4977 nt2.46□□□□□ -2.02
HRD3Q05787 KEL2YGR238C 2649 nt2.45□□□□□ -2.02
HRD3Q05787 NCL1YBL024W 2055 nt2.45□□□□□ -2.02
HRD3Q05787 STE11YLR362W 2154 nt2.45□□□□□ -2.02
HRD3Q05787 YGL239CYGL239C 315 nt2.45□□□□□ -2.02
HRD3Q05787 PEX4YGR133W 552 nt2.45□□□□□ -2.02
HRD3Q05787 TIM13YGR181W 318 nt2.45□□□□□ -2.02
HRD3Q05787 YHR007C-AYHR007C-A 216 nt2.45□□□□□ -2.02
HRD3Q05787 FPR1YNL135C 345 nt2.45□□□□□ -2.02
HRD3Q05787 PTC5YOR090C 1719 nt2.45□□□□□ -2.02
HRD3Q05787 LSM7YNL147W 348 nt2.44□□□□□ -2.02
HRD3Q05787 snR51snR51 107 nt2.44□□□□□ -2.02
HRD3Q05787 APL5YPL195W 2799 nt2.44□□□□□ -2.02
HRD3Q05787 YJL070CYJL070C 2667 nt2.44□□□□□ -2.02
HRD3Q05787 SGO1YOR073W 1773 nt2.44□□□□□ -2.02
HRD3Q05787 FIR1YER032W 2631 nt2.43□□□□□ -2.02
HRD3Q05787 UTP14YML093W 2700 nt2.43□□□□□ -2.02
HRD3Q05787 UBP11YKR098C 2154 nt2.43□□□□□ -2.02
HRD3Q05787 DNF1YER166W 4716 nt2.43□□□□□ -2.02
HRD3Q05787 SMC6YLR383W 3345 nt2.43□□□□□ -2.02
HRD3Q05787 RPL35AYDL191W 363 nt2.43□□□□□ -2.02
HRD3Q05787 QCR7YDR529C 384 nt2.43□□□□□ -2.02
HRD3Q05787 YGL024WYGL024W 336 nt2.43□□□□□ -2.02
HRD3Q05787 HOP2YGL033W 657 nt2.43□□□□□ -2.02
HRD3Q05787 RPL32YBL092W 393 nt2.43□□□□□ -2.02
HRD3Q05787 RTC6YPL183W-A 282 nt2.43□□□□□ -2.02
HRD3Q05787 IPT1YDR072C 1584 nt2.43□□□□□ -2.02
HRD3Q05787 RLI1YDR091C 1827 nt2.42□□□□□ -2.02
HRD3Q05787 MPH1YIR002C 2982 nt2.42□□□□□ -2.02
HRD3Q05787 YGL149WYGL149W 306 nt2.42□□□□□ -2.02
HRD3Q05787 TAR1YLR154W-C 375 nt2.42□□□□□ -2.02
HRD3Q05787 LCL1YPL056C 306 nt2.42□□□□□ -2.02
HRD3Q05787 YPL152W-AYPL152W-A 99 nt2.42□□□□□ -2.02
HRD3Q05787 PRP6YBR055C 2700 nt2.42□□□□□ -2.02
HRD3Q05787 MRD1YPR112C 2664 nt2.42□□□□□ -2.02
HRD3Q05787 PAC1YOR269W 1485 nt2.41□□□□□ -2.02
HRD3Q05787 CSN9YDR179C 489 nt2.41□□□□□ -2.02
HRD3Q05787 YDR209CYDR209C 414 nt2.41□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 72.1 ms